CREB3L1_1

 

 

 

 

A

C

G

T

 

Name

CREB3L1

1

247

143

181

100

 

TF group

bZIP

2

38

159

29

671

 

Polypeptide used

DBD

3

20

3

671

18

 

Ligand sequence

TAAACA20NCAA

4

61

671

0

2

 

Batch of SELEX experiment

Y

5

3

671

0

5

 

Seed sequence

NTGCCACGTCANCA

6

671

0

3

0

 

Hamming distance of sequences to seed

1

7

0

671

3

0

 

SELEX cycle

4

8

21

3

671

0

 

Number of repeats

dimeric

9

7

0

3

671

 

Comment

 

10

121

671

40

10

 

Representative matrix

no

11

671

33

72

39

 

 

 

12

60

186

125

300

 

Source:

 

13

76

671

64

79

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

671

65

167

127

 

 

 

 

 

 

 

 

 

 

 

 

CREB3L1_2

 

 

 

 

A

C

G

T

 

Name

CREB3L1

1

368

786

516

3474

 

TF group

bZIP

2

231

131

3953

295

 

Polypeptide used

DBD

3

566

3233

42

107

 

Ligand sequence

TAAACA20NCAA

4

174

3292

158

255

 

Batch of SELEX experiment

Y

5

2700

0

13

8

 

Seed sequence

TGCCACGTGGCA

6

1

3361

1

7

 

Hamming distance of sequences to seed

2

7

2

4

4275

1

 

SELEX cycle

4

8

5

14

6

4119

 

Number of repeats

dimeric

9

297

202

3788

312

 

Comment

 

10

228

84

3786

755

 

Representative matrix

yes

11

340

3358

143

343

 

Source:

 

12

2367

531

785

428

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

CREB3L1_3

 

 

 

 

A

C

G

T

 

Name

CREB3L1

1

10

23

28

228

 

TF group

bZIP

2

9

5

309

14

 

Polypeptide used

full

3

11

119

1

1

 

Ligand sequence

TAGAGT20NCG

4

7

124

2

2

 

Batch of SELEX experiment

AD

5

202

1

1

0

 

Seed sequence

TGCCACGTGGCA

6

1

128

0

0

 

Hamming distance of sequences to seed

2

7

0

0

283

0

 

SELEX cycle

4

8

1

0

0

267

 

Number of repeats

dimeric

9

10

2

263

16

 

Comment

 

10

8

2

263

28

 

Representative matrix

no

11

5

128

2

5

 

Source:

 

12

162

8

27

11

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

CREB3L1_4

 

 

 

 

A

C

G

T

 

Name

CREB3L1

1

21

13

20

12

 

TF group

bZIP

2

2

9

1

65

 

Polypeptide used

full

3

0

0

65

0

 

Ligand sequence

TAGAGT20NCG

4

1

65

0

0

 

Batch of SELEX experiment

AD

5

0

65

0

0

 

Seed sequence

NTGCCACGTCANCA

6

65

0

0

0

 

Hamming distance of sequences to seed

1

7

0

65

0

0

 

SELEX cycle

4

8

0

0

65

0

 

Number of repeats

dimeric

9

0

0

0

65

 

Comment

< 100 counts

10

4

65

1

0

 

Representative matrix

no

11

65

2

5

2

 

 

 

12

3

24

12

27

 

Source:

 

13

3

65

1

3

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

65

5

6

2