|
CLOCK |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
CLOCK |
1 |
226 |
35 |
93 |
75 |
|
TF group |
bHLH |
2 |
429 |
85 |
89 |
13 |
|
Polypeptide used |
DBD |
3 |
11 |
429 |
2 |
2 |
|
Ligand sequence |
TGAGAT20NAGA |
4 |
429 |
5 |
15 |
0 |
|
Batch of SELEX experiment |
Z |
5 |
16 |
429 |
0 |
28 |
|
Seed sequence |
NACACGTGTN |
6 |
40 |
0 |
429 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
3 |
5 |
5 |
429 |
|
SELEX cycle |
3 |
8 |
0 |
3 |
429 |
9 |
|
Number of repeats |
dimeric |
9 |
1 |
152 |
110 |
429 |
|
Comment |
|
10 |
89 |
128 |
39 |
174 |
|
Representative matrix |
yes |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |