|
BHLHB2_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
BHLHB2 |
1 |
3824 |
3025 |
2926 |
1447 |
|
TF group |
bHLH |
2 |
1391 |
481 |
5000 |
6222 |
|
Polypeptide used |
DBD |
3 |
59 |
11222 |
0 |
14 |
|
Ligand sequence |
TGGGAC20NGA |
4 |
11222 |
130 |
78 |
77 |
|
Batch of SELEX experiment |
Y |
5 |
23 |
11222 |
2 |
32 |
|
Seed sequence |
NKCACGTGMN |
6 |
66 |
30 |
11222 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
167 |
248 |
87 |
11222 |
|
SELEX cycle |
2 |
8 |
4 |
12 |
11222 |
72 |
|
Number of repeats |
dimeric |
9 |
5927 |
5295 |
129 |
500 |
|
Comment |
|
10 |
1544 |
5706 |
1385 |
2587 |
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
Bhlhb2_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
Bhlhb2 |
1 |
5770 |
3806 |
6146 |
2259 |
|
TF group |
bHLH |
2 |
1676 |
325 |
8621 |
9360 |
|
Polypeptide used |
DBD |
3 |
104 |
17981 |
36 |
4 |
|
Ligand sequence |
TCAAGG20NGAA |
4 |
17981 |
70 |
137 |
103 |
|
Batch of SELEX experiment |
Z |
5 |
0 |
17981 |
4 |
36 |
|
Seed sequence |
NKCACGTGMN |
6 |
22 |
27 |
17981 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
197 |
259 |
97 |
17981 |
|
SELEX cycle |
2 |
8 |
16 |
13 |
17981 |
69 |
|
Number of repeats |
dimeric |
9 |
10854 |
7127 |
170 |
680 |
|
Comment |
|
10 |
2352 |
8495 |
2844 |
4289 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |