|
|
ATF4_1 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ATF4 |
|
1 |
210 |
71 |
442 |
170 |
|
TF group |
bZIP |
|
2 |
169 |
117 |
409 |
213 |
|
Polypeptide used |
DBD |
|
3 |
639 |
202 |
127 |
3 |
|
Ligand sequence |
TGGAAT20NGA |
|
4 |
0 |
0 |
7 |
981 |
|
Batch of SELEX experiment |
W |
|
5 |
19 |
0 |
1090 |
11 |
|
Seed sequence |
NNATGAYGCAATN |
|
6 |
888 |
0 |
0 |
25 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
2 |
372 |
9 |
470 |
|
SELEX cycle |
3 |
|
8 |
1 |
0 |
1104 |
4 |
|
Number of repeats |
dimeric |
|
9 |
40 |
838 |
16 |
113 |
|
Comment |
|
|
10 |
897 |
21 |
0 |
3 |
|
Representative matrix |
no |
|
11 |
888 |
3 |
1 |
4 |
|
|
|
|
12 |
0 |
266 |
62 |
714 |
|
Source: |
|
|
13 |
414 |
272 |
101 |
78 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
|
|
Atf4_2 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
Atf4 |
|
1 |
598 |
125 |
146 |
177 |
|
TF group |
bZIP |
|
2 |
327 |
37 |
927 |
133 |
|
Polypeptide used |
DBD |
|
3 |
90 |
322 |
764 |
202 |
|
Ligand sequence |
TGCCGC20NGA |
|
4 |
1024 |
89 |
67 |
0 |
|
Batch of SELEX experiment |
Z |
|
5 |
0 |
2 |
0 |
1061 |
|
Seed sequence |
NGGATGATGCAATM |
|
6 |
1 |
0 |
1132 |
3 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
1114 |
0 |
0 |
1 |
|
SELEX cycle |
4 |
|
8 |
0 |
437 |
2 |
969 |
|
Number of repeats |
dimeric |
|
9 |
0 |
4 |
1234 |
0 |
|
Comment |
|
|
10 |
0 |
1195 |
0 |
49 |
|
Representative matrix |
yes |
|
11 |
1083 |
0 |
0 |
0 |
|
|
|
|
12 |
1090 |
2 |
0 |
0 |
|
Source: |
|
|
13 |
0 |
156 |
34 |
1019 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
14 |
466 |
641 |
55 |
17 |
|
|
|